Acta Med. 2009, 52: 91-99
https://doi.org/10.14712/18059694.2016.112
Studying Liver Regeneration by Means of Molecular Biology: How Far We Are in Interpreting the Findings?
References
1. Liver Transplantation 2002; 8:110–17.
< KL, Sandler RS, Shresta R. Donor morbidity assosciated with right lobectomy for living donor liver transplantation to adult recipients: a systematic review. https://doi.org/10.1053/jlts.2002.31315>
2. Int J Dev Biol 1998; 42:935–42.
KM, Sandgren EP. Liver disease and compensatory growth: unexpected lessons from genetically altered mice.
3. Int Rev Cytol 1963; 15:245–300.
< NL. Regeneration of mammalian liver. https://doi.org/10.1016/S0074-7696(08)61119-5>
4. Biochem Biophys Res Commun 2007; 360:545–52.
< V, Batusic D, Haralanova-Ilieva B, et al. Serial analysis of gene expression (SAGE) in rat liver regeneration. https://doi.org/10.1016/j.bbrc.2007.06.039>
5. British Journal of Surgery 2002; 89:1089–95.
< FG, Wemyss-Holden SA, Dennison AR, Maddern GJ. The mystery of liver regeneration. https://doi.org/10.1046/j.1365-2168.2002.02166.x>
6. Science 1996; 274:1379–83.
< DE, Greenbaum LE, DeAngelis RA, et al. Liver failure and defective hepatocyte regeneration in interleukin-6-deficient mice. https://doi.org/10.1126/science.274.5291.1379>
7. Physiol bohemoslov 1984; 33(6):501–6.
Z, Šimek J, Trojovská V. Effect of triiodothyronine or etiroxate on DNA synthesis in intact and regenerating liver.
8. Physiol Res 1992; 41:141–6.
Z, Šimek J. Effect of propylthiouracil on liver regeneration in rats after partial hepatectomy.
9. Transplantation 1995; 60:877–90.
< J, Lange R, Giebler R, Rauen U, de Groot H, Eigler FW. Arterialization of the portal vein in orthotopic and auxiliary liver transplantation. A report of three cases. https://doi.org/10.1097/00007890-199510270-00020>
10. Oncogene Research 1988; 3:255–62.
PL, Baffet G, Desvergne B, Boisnard-Rissel M, Glaise D, Guguen- Guillouzo C. Transient expression of c-fos and constant expression of c-myc in freshly isolated and cultured normal adult rat hepatocytes.
11. Hepatology 2006; 43: S45–S53.
< N, Campbell JS, Riehle KJ. Liver regeneration. https://doi.org/10.1002/hep.20969>
12. J Hepatobiliary Pancreat Surg 2005; 12:181–9.
< N, Riehle KJ. Mechanisms of liver regeneration and their clinical implications. https://doi.org/10.1007/s00534-005-0979-y>
13. Am J Physiol 1999; 277(5):G917–21.
N. Lessons from genetically engineered animal models. V. Knocking out genes to study liver regeneration: present and future.
14. Journal of Hepatology 2000; 32(suppl 1):19–31.
< N. Liver regeneration. https://doi.org/10.1016/S0168-8278(00)80412-2>
15. J Hepatol 2003; 38:784–92.
< Y, Hirasawa A, Li XK, et al. Gene expression profile in the regenerating rat liver after partial hepatectomy. https://doi.org/10.1016/S0168-8278(03)00077-1>
16. Hepatology 1984; 4:902–4.
< J, Iversen J. Rat liver regeneration after 90% partial hepatectomy. https://doi.org/10.1002/hep.1840040519>
17. Oncogene 1997; 15(10):1233–40.
< VM, Presnell SC, Hooth MJ, Smith GJ, Kaufmann WK. Expression of telomerase in normal and malignant rat hepatic epithelia. https://doi.org/10.1038/sj.onc.1201278>
18. J Clin Invest 1993; 91:1319–26.
< BA, Mohn KL, Diamond RH, Taub R. Induction patterns of 70 genes during nine days after hepatectomy define the temporal course of liver regeneration. https://doi.org/10.1172/JCI116332>
<PubMed>
19. Arch. Pathol. 1931; 12:186–202.
GM, Anderson RM. Experimental pathology of the liver. I. Restoration of the liver of the white rat following partial surgical removal.
20. Toxicologic Pathology 2002; 30(5):606–610.
< PD, Roberts T, Campbell SP, et al. Longitudinal Magnetic Resonance Imaging Quantitation of Rat Liver Regeneration After Partial Hepatectomy. https://doi.org/10.1080/01926230290105811>
21. Cancer Res 1988; 48:265–9.
LL, Peraino C, Weinstein IB. Expression of endogenous retrovirus-like sequences and cellular oncogenes during phenobarbital treatment and regeneration in rat liver.
22. Nature Protocols 2009; 4(1):44–57.
< DW, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. https://doi.org/10.1038/nprot.2008.211>
23. Nucleic Acids Research [online] 2009; 37:D690–D697.
< TJP, Aken BL, Ayling S, et al. Ensembl 2009. https://doi.org/10.1093/nar/gkn828>
<PubMed>
24. Liver Transpl 2004; 10:374–8.
< A, Kosari K, Sielaff TD, et al. Liver regeneration after adult living donor and deceased donor split-liver transplants. https://doi.org/10.1002/lt.20096>
25. Exp. Cell Res. 1989; 185:292–6.
< T, Sawada N, Fujinaga K, Minase T, Mori M. c-H-ras gene is expressed at the G1 phase in primary cultures of hepatocytes. https://doi.org/10.1016/0014-4827(89)90058-X>
26. Scand J Gastroenterol 1990; 25(2): 112–8.
< PL, Chamuleau RA, van Leeuwen DJ, Schipper HG, Busemann-Sokole E, van der Heyde MN. Liver regeneration and restoration of liver function after partial hepatectomy in patients with liver tumors. https://doi.org/10.3109/00365529009107931>
27. BMC Genomics 2008; 9:527.
< E, Vadigepalli R, Hoek JB. Temporal and functional profile of the transcriptional regulatory network in the early regenerative response to partial hepatectomy in the rat. https://doi.org/10.1186/1471-2164-9-527>
<PubMed>
28. Krejsek J, Kopecký O. Klinická imunologie. 1st ed. Hradec Králové: NUCLEUS HK, 2004:968.
29. J Biol Chem 1986; 261:7929–33.
W, Skelly H, Botteri F, et al. Proto-oncogene expression in regenerating liver is simulated in cultures of primary adult rat hepatocytes.
30. Křiváková P. Hepatocyty jako modelový systém pro studium poruch energetického metabolismu (Dissertation). [s.l.]: Univerzita Karlova v Praze, Lékařská fakulta v Hradci Králové, 2006. 135pp.
31. Hepatology 1994; 19:1521–7.
< ML, Mars WM, Zarnegar R, Michalopoulos GK. Collagenase pretreatment and the mitogenic effects of hepatocyte growth factor and transforming growth factor-alpha in adult rat liver. https://doi.org/10.1002/hep.1840190630>
32. J Biol Chem 1996; 271(19):11484–92.
< P, Cariou S, Glaise D, Bilodeau M, Baffet G, Guguen-Guillouzo C. Growth factor dependence of progression through G1 and S phases of adult rat hepatocytes in vitro. Evidence of a mitogen restriction point in mid-late G1. https://doi.org/10.1074/jbc.271.19.11484>
33. Nucleic Acids Research [online] 2005; 33:D54–D58.
< D, Ostell J, Pruitt KD, Tatusova T. Entrez Gene: gene-centered information at NCBI. https://doi.org/10.1093/nar/gki031>
<PubMed>
34. Manzarbeitia C, ed. Practical Manual of Abdominal Organ Transplantation. New York: Kluwer Academic Publishers, 2002.
35. J Immunol 2001; 166:2479–86.
< D, Papadimitriou JC, Franchini S, Tsonis PA. Lambris JD. A novel role of complement: mice deficient in the fifth component of complement (C5) exhibit impaired liver regeneration. https://doi.org/10.4049/jimmunol.166.4.2479>
36. Cancer Res 1982; 42:4673–82.
G, Cianciulli HD, Novotny AR, Kligerman AD, Strom SC, Jirtle RL. Liver regeneration studies with rat hepatocytes in primary culture.
37. Science 1997; 276:60–6.
< GK, DeFrances MC. Liver regeneration. https://doi.org/10.1126/science.276.5309.60>
38. Journal of Cellular Physiology 2007; 213:286–300.
< GK. Liver Regeneration. https://doi.org/10.1002/jcp.21172>
<PubMed>
39. Am J Physiol Gastrointest Liver Physiol 2008; 294:G819–30.
< KE, Conley LN, Hedegaard J, et al.: Regenerative response in the pig liver remnant varies with the degree of resection and rise in portal pressure. https://doi.org/10.1152/ajpgi.00179.2007>
40. Journal of Gastroenterology and Hepatology 1997; 12:633–8.
< A, Miyazaki M, Ohtawa S, Ohtsuka M, Nakajima N. Short-term effects of portal vein arterialization on hepatic protein synthesis and endotoxaemia after extended hepatectomy in dogs. https://doi.org/10.1111/j.1440-1746.1997.tb00526.x>
41. American Journal of Pathology 1997; 151:1273–80.
K, al-Dhalimy M, Ou CN, Finegold M, Grompe M. Serial transplantation reveals the stem-cell-like regenerative potential of adult mouse hepatocytes.
42. British Journal of Surgery 1997; 84:1011.
< Y, Umemoto T, Tateyama K, Katagiri Y, Katayama M, Sugiyama A. Partial portal arterialization for dearterialized liver after hepatectomy. https://doi.org/10.1002/bjs.1800840733>
43. Biomaterials 2004; 25:1601–1611.
< D, Spiegel H-U. Animal models of liver regeneration. https://doi.org/10.1016/S0142-9612(03)00508-8>
44. Transplantation 2003; 76:5–10.
< EA, Pomposelli JJ, Gordon FD, et al. Liver regeneration and surgical outcome in donors of right-lobe liver grafts. https://doi.org/10.1097/01.TP.0000079064.08263.8E>
45. Hepatology 1999; 29:403–11.
< T, Liu Z, Murase N, et al. Mitosis and apoptosis in the liver of interleukin- 6-deficient mice after partial hepatectomy. https://doi.org/10.1002/hep.510290244>
46. Exp Cell Res 1989; 181: 584–8.
< N. Hepatocytes from old rats retain responsiveness of c-myc expression to EGF in primary culture but do not enter S phase. https://doi.org/10.1016/0014-4827(89)90115-8>
47. World J Gastroenterol 2007; 13(3):369–77.
< HY, Zhao LF, Xu CS. Expression patterns and action analysis of genes associated with inflammatory responses during rat liver regeneration. https://doi.org/10.3748/wjg.v13.i3.369>
<PubMed>
48. Sherlock S, Dooley J. Nemoci jater a žlučových cest. 1st Czech edition [Czech translation editor Petr Hůlek] Hradec Králové: Čermáková, 2004:703.
49. American Journal of Surgery 1975; 129:587–90.
< TE, Putnam CW, Groth CG, Corman JL, Taubman J. Alopecia, ascites, and incomplete regeneration after 85–90 per cent liver resection. https://doi.org/10.1016/0002-9610(75)90323-2>
<PubMed>
50. FASEB Journal 1995; 9(14):1396–1400.
< CJ. Liver regeneration. https://doi.org/10.1096/fasebj.9.14.7589980>
51. Virchows Archiv 1973; 14:93–103.
E, Wullstein HK, Brau G. Capacity of regeneration in liver epithelia of juvenile, repeated partially hepatectomized rats. Autoradiographic studies after continuous infusion of 3H-thymidine (author’s transl).
52. Cancer Res 1999; 59:3954–60.
DB, Mars WM, Petersen BE, Kim TH, Michalopoulos GK. Growth factor signal transduction immediately after two-thirds partial hepatectomy in the rat.
53. J Exp Med 2003; 198:913–23.
< CW, Markiewski M, Mastellos D, et al. The proinflammatory mediators C3a and C5a are essential for liver regeneration. https://doi.org/10.1084/jem.20030374>
<PubMed>
54. Acta Cir Bras 2006; 21(suppl 1):58–62. [serial on the Internet]. Available from URL: http://www.scielo.br/acb.
< MR, Ramalho FS, Ramalho LNZ, et al. A molecular view of liver regeneration. https://doi.org/10.1590/S0102-86502006000700014>
55. Acta Cir Bras 2006; 21(suppl 1):63–66. [serial on the Internet]. Available from URL: http://www.scielo.br/acb.
< MR, Ramalho FS, Ramalho LNZ, et al. Cellular aspects of liver regeneration. https://doi.org/10.1590/S0102-86502006000700015>
56. Nature Reviews Molecular Cell Biology 2004; 5:836–47.
< R. Liver regeneration: from myth to mechanism. https://doi.org/10.1038/nrm1489>
57. The Gene Ontology Consortium. Gene ontology: tool for the unification of biology. Nature Genetics 2000; 25(1):25–9.
58. Cancer Res 1986; 46: 3111–7.
NL, Mead JE, Braun L, Goyette M, Shank PR, Fausto N. Sequential protooncogene expression during rat liver regeneration.
59. J Hepatol 2004; 40:464–71.
< S, Makino H, Kobayashi T, et al. Mechanism of liver regeneration after partial hepatectomy using mouse cDNA microarray. https://doi.org/10.1016/j.jhep.2003.11.005>
60. Nucleic Acids Research [online] 2007; 35:D658–D662.
< SN, Shimoyama M, Bromberg S, Kwitek AE, Jacob HJ. RGD Team. The Rat Genome Database, update 2007 – easing the path from disease to data and back again. https://doi.org/10.1093/nar/gkl988>
<PubMed>
61. van Bakel H, Holstege FCP. A Tutorial for DNA Microarray Expression Profiling. In: Zuk D, ed. Evaluating Techniques in Biochemical Research. Cambridge, MA: Cell Press, 2007:22–27.
62. J Hepatol 1993; 17(3):397–407.
< GT, Chamuleau RA, Pool CW, et al. Distribution and activity of glutamine synthase and carbamoylphosphate synthase upon enlargement of the liver lobule by repeated partial hepatectomies. https://doi.org/10.1016/S0168-8278(05)80224-7>
63. Comparative Hepatology 2007; 6:6.
< H, Müller A, Müller L, Petri S, Petersen J, Hillert C. Regeneration in pig livers by compensatory hyperplasia induces high levels of telomerase activity. https://doi.org/10.1186/1476-5926-6-6>
<PubMed>
64. World J Gastroenterol 2005; 11:2932–40.
< CS, Chang CF, Yuan JY, et al. Expressed genes in regenerating rat liver after partial hepatectomy. https://doi.org/10.3748/wjg.v11.i19.2932>
<PubMed>
65. World J Gastroenterol 2007; 13(24): 3323–32.
< CS, Zhang SB, Chen XG, Rahman S. Correlation analysis of liver tumorassociated genes with liver regeneration. https://doi.org/10.3748/wjg.v13.i24.3323>
<PubMed>
66. Yokoya F, Okutsu T. Gene panel participating in liver regeneration. European Patent Office Bulletin 2004/01
67. Liver Transpl 2008; 14:1007–13.
< T, Taketomi A, Uchiyama H, et al. Graft size, donor age, and patient status are the indicators of early graft function after living donor liver transplantation. https://doi.org/10.1002/lt.21462>